STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61700.1KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (214 aa)    
Predicted Functional Partners:
AEG61696.1
PFAM: Baseplate J family protein; KEGG: gym:GYMC10_5392 baseplate J family protein.
 
 
 0.978
AEG61697.1
KEGG: dae:Dtox_4249 hypothetical protein.
 
   0.978
AEG61705.1
KEGG: dae:Dtox_4241 hypothetical protein.
 
 
 0.968
AEG61699.1
KEGG: dae:Dtox_4247 hypothetical protein.
 
     0.949
AEG61695.1
KEGG: gym:GYMC10_5391 hypothetical protein.
 
     0.945
AEG61703.1
PFAM: XkdN-like protein; KEGG: dae:Dtox_4243 XkdN-like protein.
 
    0.939
AEG61704.1
PFAM: XkdM protein, phage-like element PBSX; KEGG: gym:GYMC10_5400 XkdM protein, phage-like element PBSX.
 
     0.923
AEG60009.1
PFAM: Baseplate J family protein; KEGG: ckr:CKR_2875 hypothetical protein.
 
 
 0.904
AEG59597.1
PFAM: Baseplate J family protein; KEGG: cdf:CD2900 putative phage tail protein.
 
 
 0.900
AEG59596.1
KEGG: cpy:Cphy_2951 phage protein.
 
   0.897
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.