STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61721.1KEGG: cth:Cthe_3213 hypothetical protein. (142 aa)    
Predicted Functional Partners:
AEG61722.1
PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3212 hypothetical protein.
  
    0.795
AEG61720.1
KEGG: cth:Cthe_3214 hypothetical protein.
       0.790
AEG61724.1
PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3210 hypothetical protein.
  
    0.783
AEG61725.1
KEGG: cbb:CLD_2403 hypothetical protein.
       0.782
AEG61723.1
PFAM: protein of unknown function DUF324; KEGG: cth:Cthe_3211 hypothetical protein.
  
    0.780
AEG61726.1
KEGG: pct:PC1_3262 hypothetical protein.
       0.768
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.