STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61735.1Cell wall hydrolase/autolysin; KEGG: cby:CLM_2289 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin. (235 aa)    
Predicted Functional Partners:
AEG61736.1
KEGG: cce:Ccel_2819 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis.
  
    0.805
AEG59246.1
KEGG: drm:Dred_2576 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin.
  
     0.773
AEG61744.1
PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein.
 
    0.705
AEG61737.1
Hypothetical protein; KEGG: dfe:Dfer_3080 type III restriction protein res subunit.
       0.568
AEG61738.1
Hypothetical protein; KEGG: cai:Caci_4910 glycoside hydrolase family 59.
       0.537
AEG61739.1
Hypothetical protein; KEGG: pfs:PFLU3992 putative gluconokinase.
       0.537
AEG61740.1
KEGG: bfu:BC1G_00232 hypothetical protein.
       0.526
AEG61741.1
KEGG: scl:sce6752 hypothetical protein.
       0.526
AEG59013.1
PFAM: Rhomboid family protein; KEGG: drm:Dred_2900 rhomboid family protein.
  
   0.525
AEG61742.1
Hypothetical protein; KEGG: mmw:Mmwyl1_3120 ribulose-bisphosphate carboxylase.
       0.520
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.