Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AEG61748.1TIGRFAM: phage protein, HK97 gp10 family; KEGG: gyc:GYMC61_0631 phage protein, HK97 GP10 family. (127 aa)    
Predicted Functional Partners:
AEG61746.1
TIGRFAM: phage major tail protein, phi13 family; KEGG: clj:CLJU_c03640 phage protein.
 
    0.972
AEG61749.1
TIGRFAM: phage head-tail adaptor; KEGG: bcu:BCAH820_4380 phage head-tail adaptor, putative.
 
    0.958
AEG61747.1
KEGG: bcb:BCB4264_A2628 conserved structural protein.
  
    0.952
AEG61750.1
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ccb:Clocel_0785 bacteriophage QLRG family, putative DNA packaging.
 
     0.916
AEG61744.1
PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein.
 
     0.863
AEG61751.1
KEGG: ckr:CKR_2339 hypothetical protein.
 
     0.829
AEG61752.1
TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family.
 
    0.825
AEG61754.1
KEGG: bse:Bsel_3007 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein.
 
  
 0.819
AEG61753.1
PFAM: peptidase S14 ClpP; KEGG: cce:Ccel_2835 peptidase S14 ClpP; Belongs to the peptidase S14 family.
 
     0.760
AEG61757.1
KEGG: hmo:HM1_2957 hypothetical protein.
 
     0.647
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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