STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61764.1KEGG: swo:Swol_0287 hypothetical protein. (124 aa)    
Predicted Functional Partners:
AEG61765.1
TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: swo:Swol_0286 hypothetical protein.
 
   
 0.958
AEG59453.1
KEGG: pth:PTH_0396 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
  
     0.641
AEG61761.1
KEGG: hmo:HM1_2948 hypothetical protein.
 
    0.556
AEG60413.1
KEGG: pth:PTH_1837 hypothetical protein.
  
     0.545
AEG61744.1
PFAM: G-protein, gamma-like subunit; KEGG: cth:Cthe_1709 phage-related protein-like protein.
 
     0.538
AEG59454.1
KEGG: pth:PTH_0397 cytotoxic translational repressor.
 
   
 0.506
AEG60249.1
KEGG: sat:SYN_01170 putative cytoplasmic protein.
  
     0.485
AEG61762.1
KEGG: hmo:HM1_2946 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the N(4)/N(6)-methyltransferase family.
       0.485
AEG61763.1
KEGG: hmo:HM1_2945 hypothetical protein.
       0.485
AEG61760.1
KEGG: thx:Thet_1662 hypothetical protein.
 
     0.475
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.