STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61782.1KEGG: thx:Thet_1683 hypothetical protein. (153 aa)    
Predicted Functional Partners:
AEG61783.1
KEGG: thx:Thet_1684 hypothetical protein.
       0.815
AEG61781.1
KEGG: thx:Thet_1682 hypothetical protein.
       0.814
AEG61784.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: thx:Thet_1685 DNA-binding domain-containing protein, excisionase family.
       0.701
AEG61785.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: pmz:HMPREF0659_A6123 putative type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
       0.693
AEG61786.1
PFAM: restriction modification system DNA specificity domain; KEGG: nmn:NMCC_1141 hypothetical protein.
       0.693
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.