STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61786.1PFAM: restriction modification system DNA specificity domain; KEGG: nmn:NMCC_1141 hypothetical protein. (169 aa)    
Predicted Functional Partners:
AEG61785.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: pmz:HMPREF0659_A6123 putative type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
 
 
 0.997
AEG61790.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.950
AEG61788.1
PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0437 type I restriction enzyme S protein.
 
     0.857
AEG61784.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: thx:Thet_1685 DNA-binding domain-containing protein, excisionase family.
       0.785
AEG61781.1
KEGG: thx:Thet_1682 hypothetical protein.
  
    0.709
AEG61783.1
KEGG: thx:Thet_1684 hypothetical protein.
       0.701
AEG61787.1
PFAM: integrase family protein; KEGG: clo:HMPREF0868_0492 phage integrase, N-terminal SAM domain protein; Belongs to the 'phage' integrase family.
 
   
 0.697
AEG61782.1
KEGG: thx:Thet_1683 hypothetical protein.
       0.693
AEG60058.1
PFAM: AAA-4 family protein; KEGG: drm:Dred_2059 putative transcriptional regulator.
  
    0.637
AEG61791.1
PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: fma:FMG_1371 hypothetical protein.
 
    0.600
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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