STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61787.1PFAM: integrase family protein; KEGG: clo:HMPREF0868_0492 phage integrase, N-terminal SAM domain protein; Belongs to the 'phage' integrase family. (330 aa)    
Predicted Functional Partners:
AEG61788.1
PFAM: restriction modification system DNA specificity domain; KEGG: hpa:HPAG1_0437 type I restriction enzyme S protein.
 
   
 0.909
AEG61790.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.879
AEG61791.1
PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: fma:FMG_1371 hypothetical protein.
 
    0.751
AEG61786.1
PFAM: restriction modification system DNA specificity domain; KEGG: nmn:NMCC_1141 hypothetical protein.
 
   
 0.697
AEG61785.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: pmz:HMPREF0659_A6123 putative type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase.
 
   
 0.693
AEG61789.1
KEGG: aca:ACP_3246 hypothetical protein.
       0.665
hslV
20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.480
AEG61835.1
KEGG: drm:Dred_3081 phosphoribosyltransferase.
   
    0.465
AEG61167.1
PFAM: Prephenate dehydrogenase; KEGG: drm:Dred_1150 prephenate dehydrogenase.
  
    0.427
AEG61869.1
KEGG: ecr:ECIAI1_2101 ATP binding component of ABC-transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.418
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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