STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61914.1KEGG: drm:Dred_3177 hypothetical protein. (232 aa)    
Predicted Functional Partners:
AEG61915.1
KEGG: drm:Dred_3178 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.739
AEG61296.1
PFAM: Sporulation stage III protein AF; KEGG: drm:Dred_1061 hypothetical protein.
  
     0.735
AEG61916.1
KEGG: drm:Dred_3179 hypothetical protein.
 
     0.713
AEG60208.1
KEGG: drm:Dred_1912 hypothetical protein.
  
     0.650
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.600
AEG61514.1
KEGG: drm:Dred_0711 hypothetical protein.
  
     0.594
AEG58491.1
PFAM: Sigma-70 region 4 type 2; KEGG: drm:Dred_0120 ECF subfamily RNA polymerase sigma-24 factor.
  
     0.587
AEG60478.1
KEGG: drm:Dred_1746 hypothetical protein.
  
     0.582
AEG60202.1
KEGG: drm:Dred_1918 hypothetical protein.
  
     0.575
AEG59543.1
KEGG: drm:Dred_2377 hypothetical protein.
  
     0.545
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.