STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61916.1KEGG: drm:Dred_3179 hypothetical protein. (271 aa)    
Predicted Functional Partners:
AEG61917.1
KEGG: drm:Dred_3180 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49.
 
     0.927
AEG60920.1
KEGG: drm:Dred_1332 hypothetical protein.
  
     0.751
AEG59932.1
KEGG: drm:Dred_2123 type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.744
AEG61914.1
KEGG: drm:Dred_3177 hypothetical protein.
 
     0.713
AEG61853.1
KEGG: drm:Dred_3106 hypothetical protein.
  
     0.698
AEG59034.1
KEGG: drm:Dred_2880 hypothetical protein.
  
     0.687
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.680
AEG59904.1
KEGG: drm:Dred_2147 hypothetical protein.
  
     0.672
AEG59517.1
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: drm:Dred_2403 flagellar hook-length control protein.
  
     0.667
AEG60217.1
KEGG: drm:Dred_1905 hypothetical protein.
  
     0.664
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.