STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61937.1KEGG: drm:Dred_3200 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (62 aa)    
Predicted Functional Partners:
AEG61407.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: toc:Toce_0243 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.861
AEG61936.1
PFAM: Nitrate reductase gamma subunit; KEGG: drm:Dred_3199 nitrate reductase, gamma subunit.
 
   
 0.778
AEG58905.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: drm:Dred_2929 heat domain-containing protein.
 
     0.774
AEG61935.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: drm:Dred_3198 hypothetical protein.
 
     0.761
AEG61923.1
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
  
 0.748
AEG58680.1
TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: drm:Dred_3186 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
 
  
 0.746
AEG61924.1
TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
  
 0.735
AEG58681.1
TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: drm:Dred_3187 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region.
 
  
 0.732
AEG61934.1
TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; KEGG: drm:Dred_3197 DsrC family protein; PFAM: DsrC family protein.
 
   
 0.647
AEG61580.1
KEGG: drm:Dred_0637 adenylylsulfate reductase subunit alpha; TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: FAD dependent oxidoreductase.
 
 
 0.625
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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