STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61955.1KEGG: drm:Dred_0969 hypothetical protein. (533 aa)    
Predicted Functional Partners:
AEG61953.1
KEGG: drm:Dred_0966 hypothetical protein.
  
 
 0.689
AEG61954.1
KEGG: drm:Dred_0965 hypothetical protein.
       0.621
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.492
AEG61956.1
KEGG: saq:Sare_3343 hypothetical protein.
      
0.483
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
   
 
 0.470
AEG58993.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: dae:Dtox_3724 cell divisionFtsK/SpoIIIE.
   
 
 0.454
AEG60185.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: drm:Dred_1934 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.454
AEG61952.1
PFAM: VanW family protein; KEGG: mta:Moth_0694 copper amine oxidase-like.
       0.454
AEG58458.1
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: drm:Dred_0089 peptidase S8/S53 subtilisin kexin sedolisin.
   
 
 0.416
AEG58739.1
VRR-NUC domain-containing protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 
 0.416
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.