STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61959.1PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_0967 phage integrase family protein; Belongs to the 'phage' integrase family. (322 aa)    
Predicted Functional Partners:
AEG58990.1
PFAM: integrase family protein; KEGG: dae:Dtox_1846 integrase family protein; Belongs to the 'phage' integrase family.
  
     0.688
AEG59340.1
PFAM: integrase family protein; KEGG: tit:Thit_1365 integrase family protein; Belongs to the 'phage' integrase family.
  
  
 0.609
AEG61960.1
Hypothetical protein.
       0.570
AEG61961.1
PFAM: glycosyl transferase family 2; KEGG: mbn:Mboo_1769 glycosyl transferase family protein.
       0.570
AEG60185.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: drm:Dred_1934 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
   
 0.546
AEG61835.1
KEGG: drm:Dred_3081 phosphoribosyltransferase.
  
    0.546
AEG58993.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: dae:Dtox_3724 cell divisionFtsK/SpoIIIE.
  
   
 0.540
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
   
 0.522
hslV
20S proteasome A and B subunits; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.480
AEG61167.1
PFAM: Prephenate dehydrogenase; KEGG: drm:Dred_1150 prephenate dehydrogenase.
  
    0.427
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.