STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61975.1KEGG: drm:Dred_2787 hypothetical protein. (613 aa)    
Predicted Functional Partners:
AEG61976.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_0168 hypothetical protein.
 
     0.871
AEG61977.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: drm:Dred_0937 filamentation induced by cAMP protein Fic.
 
     0.843
AEG61205.1
KEGG: drm:Dred_0322 Fis family transcriptional regulator.
  
     0.774
AEG61987.1
KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein.
 
     0.764
AEG61093.1
KEGG: drm:Dred_1516 hypothetical protein.
  
     0.760
AEG59575.1
KEGG: drm:Dred_2345 pyrrolo-quinoline quinone.
 
   
 0.751
AEG60940.1
PFAM: hypothetical protein; KEGG: drm:Dred_1314 hypothetical protein.
  
     0.750
AEG61972.1
KEGG: dae:Dtox_2491 Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein.
 
     0.745
AEG58924.1
PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2917 S-layer domain-containing protein.
  
     0.733
AEG60282.1
KEGG: drm:Dred_1513 CBS domain-containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein.
  
     0.732
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.