STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCPilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (135 aa)    
Predicted Functional Partners:
AEG61984.1
KEGG: dae:Dtox_2499 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
     
 0.801
AEG61981.1
KEGG: mta:Moth_1940 hypothetical protein.
 
   
 0.699
AEG58342.1
KEGG: dae:Dtox_0495 hypothetical protein.
  
     0.668
AEG58961.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.613
AEG61881.1
PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4154 copper amine oxidase domain protein.
  
     0.604
AEG58962.1
KEGG: dau:Daud_2130 PilT domain-containing protein.
  
  
 0.576
AEG61072.1
PFAM: PilT protein domain protein; KEGG: dau:Daud_2130 PilT domain-containing protein.
  
  
 0.566
AEG61985.1
KEGG: nca:Noca_3116 type II secretion system protein E.
       0.565
AEG61987.1
KEGG: dae:Dtox_2503 chromosome partitioning ATPase-like protein.
 
     0.530
AEG61699.1
KEGG: dae:Dtox_4247 hypothetical protein.
  
     0.521
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.