STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG61986.1TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aae:aq_035 hypothetical protein; SMART: GGDEF domain containing protein. (277 aa)    
Predicted Functional Partners:
AEG58374.1
KEGG: acl:ACL_0673 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
   0.939
AEG58942.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: drm:Dred_0799 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
 
 
0.935
AEG60596.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: clj:CLJU_c30680 putative response regulator; SMART: GGDEF domain containing protein.
  
  
 
0.924
AEG58967.1
EAL domain protein; KEGG: drm:Dred_0836 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein.
  
 0.908
AEG59851.1
TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: dhd:Dhaf_2104 PTS system, lactose/cellobiose family IIC subunit; SMART: EAL domain protein.
  
 0.907
AEG60265.1
Response regulator receiver; KEGG: hmo:HM1_2078 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
 
    0.895
AEG61387.1
Response regulator receiver; KEGG: drm:Dred_0759 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
 
 
    0.846
AEG59916.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: drm:Dred_2145 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
 
 0.844
AEG60726.1
EAL domain protein; KEGG: pth:PTH_0666 signaling protein; PFAM: EAL domain protein; SMART: EAL domain protein.
  
 0.813
AEG61332.1
KEGG: cpf:CPF_1811 GGDEF/HD domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
   0.794
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.