STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG62087.1KEGG: drm:Dred_3313 hypothetical protein. (351 aa)    
Predicted Functional Partners:
AEG62088.1
Sporulation protein YyaC; KEGG: drm:Dred_3314 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256.
 
    0.818
AEG62086.1
PFAM: Colicin V production protein; KEGG: drm:Dred_3312 hypothetical protein.
       0.668
AEG60710.1
Sporulation protein YtxC; KEGG: drm:Dred_1610 hypothetical protein; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC.
 
     0.649
AEG62085.1
PFAM: peptidase M18 aminopeptidase I; KEGG: drm:Dred_3311 putative aminopeptidase 1.
 
     0.610
AEG61630.1
PFAM: small acid-soluble spore protein alpha/beta type; KEGG: drm:Dred_0468 small acid-soluble spore protein, alpha/beta type.
  
     0.482
AEG61248.1
KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
    0.469
AEG60517.1
KEGG: drm:Dred_1734 spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
    0.450
AEG62083.1
PFAM: protein of unknown function DUF951; KEGG: drm:Dred_3309 hypothetical protein.
       0.445
AEG60600.1
KEGG: dae:Dtox_0584 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
  
    0.423
AEG62084.1
PFAM: MscS Mechanosensitive ion channel; KEGG: drm:Dred_3310 MscS mechanosensitive ion channel.
       0.422
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.