STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG62092.1TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: drm:Dred_3320 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family. (293 aa)    
Predicted Functional Partners:
AEG62093.1
KEGG: drm:Dred_3321 cobyrinic acid a,c-diamide synthase.
 
 
 0.988
AEG59002.1
KEGG: drm:Dred_0892 cobyrinic acid a,c-diamide synthase.
 
 
 0.950
AEG62091.1
PFAM: protein of unknown function DUF554; KEGG: drm:Dred_3319 hypothetical protein.
       0.712
AEG60185.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: drm:Dred_1934 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.706
AEG58993.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: dae:Dtox_3724 cell divisionFtsK/SpoIIIE.
  
  
 0.687
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.662
AEG62094.1
KEGG: scl:sce5626 leucine responsive regulatory protein; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type.
     
 0.550
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.541
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.523
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.509
Your Current Organism:
Desulfotomaculum ruminis
NCBI taxonomy Id: 696281
Other names: D. ruminis DSM 2154, Desulfotomaculum ruminis ATCC 23193, Desulfotomaculum ruminis DL, Desulfotomaculum ruminis DSM 2154, Desulfotomaculum ruminis str. DSM 2154, Desulfotomaculum ruminis strain DSM 2154
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