STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI95287.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
OJI94878.1
Hypothetical protein.
  
     0.765
OJI93081.1
Hypothetical protein.
  
     0.745
OJI95053.1
Hypothetical protein.
  
     0.735
OJI93949.1
Hypothetical protein.
  
     0.718
sufE
Cysteine desulfuration protein SufE.
       0.698
OJI94090.1
Hypothetical protein.
  
     0.688
OJI93826.1
Hypothetical protein.
  
     0.659
OJI93627.1
Hypothetical protein.
  
     0.652
OJI93520.1
Hypothetical protein.
  
     0.616
OJI94358.1
Putative peptidoglycan binding domain protein.
  
     0.605
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.