STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiD_2Glutathione transport system permease protein GsiD. (396 aa)    
Predicted Functional Partners:
dppB_1
Dipeptide transport system permease protein DppB.
 
  
  0.995
gsiA_3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
  0.918
hbpA_1
Heme-binding protein A precursor.
 
 
 0.906
OJI92562.1
Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
  
     0.735
OJI92552.1
Fatty acid desaturase.
  
     0.731
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
  
  0.710
OJI93136.1
Sarcosine oxidase, gamma subunit family.
  
     0.679
gsiA_6
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
  0.672
gsiA_8
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
  0.665
mlr_9
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
     0.639
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.