STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phnJalpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (283 aa)    
Predicted Functional Partners:
phnK
Putative phosphonates utilization ATP-binding protein PhnK.
 
 0.999
phnI
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI.
 
 
 0.999
phnH
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH.
 
 
 0.999
phnG
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG.
 
 
 0.999
phnL
alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL.
 
 
 0.998
phnF
Putative transcriptional regulator PhnF.
 
  
 0.984
phnM_2
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 
 0.976
phnM_3
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 
 0.975
phnN
Ribose 1,5-bisphosphate phosphokinase PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).
 
  
 0.972
phnM_1
alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase.
 
 
 0.953
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.