Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJI92689.1 | OJI93694.1 | PFRI_31740 | PFRI_20770 | Hypothetical protein. | Hypothetical protein. | 0.771 |
OJI92689.1 | mepM_2 | PFRI_31740 | PFRI_13520 | Hypothetical protein. | Murein DD-endopeptidase MepM. | 0.421 |
OJI92689.1 | nlpD_2 | PFRI_31740 | PFRI_15470 | Hypothetical protein. | Murein hydrolase activator NlpD precursor. | 0.654 |
OJI93694.1 | OJI92689.1 | PFRI_20770 | PFRI_31740 | Hypothetical protein. | Hypothetical protein. | 0.771 |
OJI93694.1 | nlpD_2 | PFRI_20770 | PFRI_15470 | Hypothetical protein. | Murein hydrolase activator NlpD precursor. | 0.578 |
acr1 | nlpD_2 | PFRI_15500 | PFRI_15470 | Fatty acyl-CoA reductase. | Murein hydrolase activator NlpD precursor. | 0.568 |
acr1 | pcm_1 | PFRI_15500 | PFRI_15480 | Fatty acyl-CoA reductase. | protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.700 |
acr1 | surE | PFRI_15500 | PFRI_15490 | Fatty acyl-CoA reductase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.701 |
cphA_2 | mepM_2 | PFRI_20220 | PFRI_13520 | Cyanophycin synthetase. | Murein DD-endopeptidase MepM. | 0.544 |
cphA_2 | nlpD_2 | PFRI_20220 | PFRI_15470 | Cyanophycin synthetase. | Murein hydrolase activator NlpD precursor. | 0.544 |
cphA_2 | pbpG | PFRI_20220 | PFRI_09010 | Cyanophycin synthetase. | Penicillin-binding protein 2D. | 0.409 |
hfq | nlpD_2 | PFRI_31890 | PFRI_15470 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Murein hydrolase activator NlpD precursor. | 0.583 |
mepM_2 | OJI92689.1 | PFRI_13520 | PFRI_31740 | Murein DD-endopeptidase MepM. | Hypothetical protein. | 0.421 |
mepM_2 | cphA_2 | PFRI_13520 | PFRI_20220 | Murein DD-endopeptidase MepM. | Cyanophycin synthetase. | 0.544 |
mepM_2 | mrcA | PFRI_13520 | PFRI_19870 | Murein DD-endopeptidase MepM. | Penicillin-binding protein 1A. | 0.701 |
mepM_2 | nlpD_2 | PFRI_13520 | PFRI_15470 | Murein DD-endopeptidase MepM. | Murein hydrolase activator NlpD precursor. | 0.762 |
mepM_2 | pbpG | PFRI_13520 | PFRI_09010 | Murein DD-endopeptidase MepM. | Penicillin-binding protein 2D. | 0.683 |
mrcA | mepM_2 | PFRI_19870 | PFRI_13520 | Penicillin-binding protein 1A. | Murein DD-endopeptidase MepM. | 0.701 |
mrcA | nlpD_2 | PFRI_19870 | PFRI_15470 | Penicillin-binding protein 1A. | Murein hydrolase activator NlpD precursor. | 0.624 |
mrcA | pbpG | PFRI_19870 | PFRI_09010 | Penicillin-binding protein 1A. | Penicillin-binding protein 2D. | 0.950 |
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