STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI94146.1Sel1 repeat protein. (156 aa)    
Predicted Functional Partners:
OJI95333.1
ATPase family.
   
 0.835
ccpA_4
Cytochrome c551 peroxidase precursor.
 
     0.782
hcpC_2
Putative beta-lactamase HcpC precursor.
  
     0.755
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.674
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.663
OJI93671.1
Blue-light-activated protein.
    
 0.630
OJI95580.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
  
     0.595
yiaO_1
2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor.
  
     0.558
dnaK_1
Chaperone protein DnaK.
   
 
 0.489
dnaK_2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.489
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.