STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmEMultiple sugar-binding protein precursor. (421 aa)    
Predicted Functional Partners:
araQ_3
L-arabinose transport system permease protein AraQ.
 
 0.999
lacF_2
Lactose transport system permease protein LacF.
 
  0.978
ugpC_3
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
  0.913
rafA
Alpha-galactosidase.
 
  
 0.905
lacF_3
Lactose transport system permease protein LacF.
 
  0.868
OJI94158.1
Beta-galactosidase.
 
   
 0.863
lacF_1
Lactose transport system permease protein LacF.
  
  0.828
ugpA
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.828
sugA
Trehalose transport system permease protein SugA.
  
  0.828
ycjO
Inner membrane ABC transporter permease protein YcjO.
  
  0.828
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.