STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI93752.1Hypothetical protein. (437 aa)    
Predicted Functional Partners:
OJI93754.1
Hypothetical protein.
 
     0.784
OJI93753.1
Hypothetical protein.
       0.636
hlyA_7
Hemolysin, plasmid.
 
  
  0.611
OJI95586.1
Hypothetical protein.
  
  
  0.573
cphA_2
Cyanophycin synthetase.
    
 0.544
tmd
Trimethylamine dehydrogenase.
  
    0.515
OJI93750.1
Hypothetical protein.
       0.506
exsH
Endo-1,3-1,4-beta-glycanase ExsH.
 
      0.481
OJI93748.1
Tripartite tricarboxylate transporter TctA family protein.
       0.474
mlr_7
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
       0.474
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.