Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cysG | lrp_5 | PFRI_15800 | PFRI_22820 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | Leucine-responsive regulatory protein. | 0.668 |
hpd_2 | kefC_1 | PFRI_22830 | PFRI_22810 | 4-hydroxyphenylpyruvate dioxygenase. | Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.522 |
hpd_2 | lrp_5 | PFRI_22830 | PFRI_22820 | 4-hydroxyphenylpyruvate dioxygenase. | Leucine-responsive regulatory protein. | 0.625 |
kefC_1 | hpd_2 | PFRI_22810 | PFRI_22830 | Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.522 |
kefC_1 | lrp_5 | PFRI_22810 | PFRI_22820 | Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Leucine-responsive regulatory protein. | 0.697 |
lrp_5 | cysG | PFRI_22820 | PFRI_15800 | Leucine-responsive regulatory protein. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | 0.668 |
lrp_5 | hpd_2 | PFRI_22820 | PFRI_22830 | Leucine-responsive regulatory protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.625 |
lrp_5 | kefC_1 | PFRI_22820 | PFRI_22810 | Leucine-responsive regulatory protein. | Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.697 |