STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI93416.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
gstB_1
Glutathione S-transferase GstB; Belongs to the GST superfamily.
  
  
  0.888
yibF_2
Putative GST-like protein YibF.
  
 
  0.887
garB
Glutathione amide reductase; Maintains high levels of reduced glutathione.
     
 0.884
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
     
 0.871
OJI95197.1
ChaC-like protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.868
gstB_2
Glutathione S-transferase GST-6.0.
  
  
 0.752
gstB_3
Glutathione S-transferase GST-6.0; Belongs to the GST superfamily.
  
  
 0.742
cobC
Alpha-ribazole phosphatase.
       0.727
comM
Competence protein ComM.
       0.724
cobP
Bifunctional adenosylcobalamin biosynthesis protein CobP; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
       0.709
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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