STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI93333.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
OJI93099.1
Hypothetical protein.
  
     0.754
ihfA_2
Integration host factor subunit alpha.
  
     0.754
OJI93100.1
Hypothetical protein.
  
     0.747
rlmI
Ribosomal RNA large subunit methyltransferase I.
       0.739
OJI93485.1
Hypothetical protein.
  
     0.738
OJI93335.1
Hypothetical protein.
       0.737
OJI93471.1
Hypothetical protein.
  
     0.567
hlyA_7
Hemolysin, plasmid.
  
     0.562
OJI93484.1
Hypothetical protein.
  
     0.557
OJI93154.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.