STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI92851.1Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (347 aa)    
Predicted Functional Partners:
lsrA
Autoinducer 2 import ATP-binding protein LsrA.
 
 0.985
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.973
OJI93436.1
L-arabinose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.973
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.972
tmpC_2
Membrane lipoprotein TmpC precursor.
 
 
 0.971
OJI92852.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
0.957
tmpC_1
Membrane lipoprotein TmpC precursor.
 
 
 0.953
OJI95221.1
Purine-binding protein precursor.
 
 
 0.933
OJI95220.1
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
0.925
udp
Uridine phosphorylase.
       0.786
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.