STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC_1Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (357 aa)    
Predicted Functional Partners:
mglB
D-galactose-binding periplasmic protein precursor.
 0.997
rbsA_2
Ribose import ATP-binding protein RbsA.
 0.991
mglA_3
Galactose/methyl galactoside import ATP-binding protein MglA.
 0.974
mglA_4
Galactose/methyl galactoside import ATP-binding protein MglA.
 0.974
rbsA_1
Ribose import ATP-binding protein RbsA.
 0.949
lsrB
Autoinducer 2-binding protein LsrB precursor.
 0.947
alsB
D-allose-binding periplasmic protein precursor.
 0.944
purR
HTH-type transcriptional repressor PurR.
 
 
 0.859
ccpA_1
Catabolite control protein A.
  
 0.765
OJI94333.1
DNA-binding transcriptional repressor MalI.
  
 0.765
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.