STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hddCD-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase. (356 aa)    
Predicted Functional Partners:
guaA_1
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.989
selB
Selenocysteine-specific elongation factor.
   
 0.983
neuB
N,N'-diacetyllegionaminic acid synthase.
 
  
 0.978
legF
CMP-N,N'-diacetyllegionaminic acid synthase.
  
 0.971
OJI92464.1
UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing).
 
 
 0.960
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.948
pglF_2
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
  
 0.900
algA
Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.888
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
 
 0.859
iolG
Inositol 2-dehydrogenase.
 
    0.823
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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