STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI92436.1Bacterial extracellular solute-binding protein, family 7. (355 aa)    
Predicted Functional Partners:
OJI92437.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
 
     0.874
teaC_2
Ectoine TRAP transporter large permease protein TeaC.
 
    0.777
OJI92357.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
  
     0.770
siaT_20
Sialic acid TRAP transporter permease protein SiaT.
  
    0.667
limB
Limonene 1,2-monooxygenase.
 
     0.637
OJI92431.1
Bacterial regulatory protein, tetR family.
  
     0.514
OJI94759.1
DctM-like transporter.
  
    0.506
OJI92362.1
YciI-like protein.
  
     0.474
yiaO_2
2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor.
  
     0.464
OJI95389.1
Tripartite ATP-independent periplasmic transporter, DctQ component.
  
    0.463
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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