STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI91965.1PBP superfamily domain protein. (267 aa)    
Predicted Functional Partners:
artM_2
Arginine transport ATP-binding protein ArtM.
 
  
  0.995
cysW_1
Sulfate transport system permease protein CysW.
 
  
 0.982
OJI94714.1
Sulfate/thiosulfate transporter subunit.
 
  
 0.927
metN_1
Methionine import ATP-binding protein MetN.
 
  
  0.803
fdhD
Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.724
OJI92663.1
Putative formate dehydrogenase.
 
     0.614
fdhF
Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.602
fdhB1
Formate dehydrogenase iron-sulfur subunit.
 
   
 0.507
nqo1_2
NADH-quinone oxidoreductase subunit 1.
 
     0.451
torD
Chaperone protein TorD.
 
     0.417
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.