STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95237.1KEGG: bbe:BBR47_53590 hypothetical protein; SPTR: Putative uncharacterized protein. (92 aa)    
Predicted Functional Partners:
AEE95236.1
COGs: COG2247 Putative cell wall-binding domain; InterPro IPR007253; KEGG: clj:CLJU_c18660 putative cell wall-binding protein; PFAM: cell wall binding repeat 2-containing protein; SPTR: Putative uncharacterized protein; PFAM: Putative cell wall binding repeat 2.
       0.661
AEE95235.1
KEGG: mma:MM_1676 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.577
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.