STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95312.1KEGG: cth:Cthe_2464 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacteriophage Mu Gam like protein. (175 aa)    
Predicted Functional Partners:
AEE95313.1
KEGG: cth:Cthe_2465 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.621
recU
Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
       0.514
AEE95310.1
KEGG: vcj:VCD_003663 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.500
AEE95304.1
Sigma-70 region 4 type 2; InterPro IPR013249; KEGG: dfe:Dfer_2829 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70, region 4.
       0.499
AEE95305.1
KEGG: cmi:pCM2_0038 hypothetical protein.
       0.499
AEE95307.1
KEGG: ate:Athe_2442 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.499
AEE95308.1
Hypothetical protein; KEGG: gfo:GFO_2634 two-component system sensor histidine kinase; SPTR: Two-component system sensor histidine kinase.
       0.499
AEE95309.1
KEGG: cba:CLB_2468 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Loader and inhibitor of phage G40P.
       0.499
AEE95314.1
KEGG: ath:AT3G12150 hypothetical protein.
       0.441
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.