STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95323.1KEGG: tit:Thit_1414 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955). (128 aa)    
Predicted Functional Partners:
AEE95324.1
COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055: IPR006054: IPR013520; KEGG: ctc:CTC01271 DNA polymerase III PolC; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: DNA polymerase III polC-type; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.
       0.773
AEE95322.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tit:Thit_1413 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
       0.631
AEE95325.1
KEGG: csc:Csac_1015 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.563
AEE95321.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: cth:Cthe_2461 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
       0.445
AEE95320.1
Hypothetical protein; KEGG: asa:ASA_0522 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; SPTR: Putative uncharacterized protein.
       0.434
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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