STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95380.1Restriction endonuclease, type II, MjaII; InterPro IPR019045; KEGG: coc:Coch_0686 type II restriction endonuclease TdeIII; PFAM: Restriction endonuclease, type II, MjaII; SPTR: Type II restriction endonuclease TdeIII; PFAM: MjaII restriction endonuclease. (259 aa)    
Predicted Functional Partners:
AEE95381.1
InterPro IPR002941; KEGG: cts:Ctha_1153 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase.
 
     0.948
AEE95379.1
Radical SAM domain protein; COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR006638: IPR007197; KEGG: tjr:TherJR_1012 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.737
AEE96496.1
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterPro IPR002941: IPR001091: IPR002052; KEGG: cyn:Cyan7425_0828 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.537
AEE95382.1
Major facilitator superfamily MFS_1; InterPro IPR011701: IPR005829; KEGG: bpf:BpOF4_19135 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Nucleoside H+ symporter; TIGRFAM: oligosaccharide:H+ symporter.
       0.456
AEE95385.1
Uncharacterized protein family UPF0133; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
 
     0.417
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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