STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95448.1Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR011583: IPR000209: IPR007280: IPR001223: IPR 007253; KEGG: tjr:TherJR_2324 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; glycoside hydrolase family 18; cell wall binding repeat 2-containing protein; SMART: chitinase II; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Putative cell wall binding repeat 2; Glycosyl hydrolases family 18; Bacterial pre-peptidase C-terminal domain; Subtilas [...] (1212 aa)    
Predicted Functional Partners:
AEE95447.1
Hypothetical protein; KEGG: dre:798921 si:ch211-217k17.9; SPTR: Putative uncharacterized protein.
  
 
 0.670
AEE96187.1
COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442: IPR005543: IPR017441: IPR008271: IPR 020635: IPR002290: IPR000719; KEGG: tmt:Tmath_1356 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain; PASTA domain.
     
 0.613
AEE97929.1
Peptidoglycan-binding lysin domain protein; InterPro IPR002502: IPR018392: IPR002482; KEGG: pmo:Pmob_0425 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding lysin domain protein; PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain.
  
  
 0.603
AEE95446.1
Hypothetical protein; KEGG: ctc:CTC00260 N-acetylmuramoyl-L-alanine amidase; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: Copper resistance protein CopC.
  
 0.590
AEE97102.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173: IPR001440: IPR019734: IPR013026: IPR 001969; KEGG: clj:CLJU_c04550 putative glycosyltransferase; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Glycosyl transferase family 2; PFAM: Tetratricopeptide repeat; Glycosyl transferase family 2.
  
 
 0.588
AEE96313.1
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterPro IPR001547: IPR003961; KEGG: cai:Caci_4214 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5); Fibronectin type III domain; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.559
AEE97187.1
ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR018329: IPR011545: IPR001650: IPR014021: IPR 014001; KEGG: caa:Caka_2440 ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family.
 
   
 0.557
secY
Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
   
 
 0.529
AEE95449.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439: IPR017940: IPR001140: IPR 017871; KEGG: csc:Csac_2201 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
 0.519
AEE95450.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439: IPR017940: IPR001140: IPR 017871; KEGG: csc:Csac_2202 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.
  
 
 0.519
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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