STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95580.1Orn/Lys/Arg decarboxylase major region; COGs: COG1982 Arginine/lysine/ornithine decarboxylase; InterPro IPR000310: IPR008286; KEGG: tte:TTE0093 arginine/lysine/ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; SPTR: Arginine/lysine/ornithine decarboxylases; manually curated; PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain. (485 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.811
AEE95579.1
LL-diaminopimelate aminotransferase apoenzyme; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR004839; KEGG: csc:Csac_0772 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Aminotransferase; PFAM: Aminotransferase class I and II.
     
 0.791
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
 
   
 0.780
AEE95577.1
Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: tte:TTE0667 cell wall biogenesis regulatory protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.740
AEE95586.1
PSP1 domain protein; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: aoe:Clos_0063 PSP1 domain-containing protein; PFAM: PSP1 domain protein; SPTR: PSP1 domain protein; PFAM: PSP1 C-terminal conserved region.
  
    0.727
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
 0.708
AEE96581.1
COGs: COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance; InterPro IPR009651; KEGG: clj:CLJU_c21200 putative aluminum resistance protein; PFAM: Aluminium resistance family protein; SPTR: Aluminium resistance family protein; PFAM: Aluminium resistance protein.
 
   
 0.707
AEE95582.1
O-antigen polymerase; InterPro IPR007016; KEGG: spn:SP_1893 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase.
       0.675
AEE95584.1
Protein of unknown function DUF327; COGs: COG1728 conserved hypothetical protein; InterPro IPR005585; KEGG: tpd:Teth39_2148 hypothetical protein; PFAM: protein of unknown function DUF327; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF327).
  
    0.656
AEE95583.1
Protein of unknown function DUF970; COGs: COG3870 conserved hypothetical protein; InterPro IPR010375; KEGG: tpd:Teth39_2149 hypothetical protein; PFAM: protein of unknown function DUF970; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF970).
  
    0.646
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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