STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rexCoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (218 aa)    
Predicted Functional Partners:
AEE95591.1
PRC-barrel domain protein; InterPro IPR007903; KEGG: tjr:TherJR_2358 PRC-barrel domain protein; PFAM: PRC-barrel domain protein; SPTR: PRC-barrel domain protein; PFAM: PRC-barrel domain.
       0.773
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.760
AEE95592.1
VanW family protein; COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391: IPR011098; KEGG: tte:TTE1768 hypothetical protein; PFAM: VanW family protein; G5 domain protein; SPTR: Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain.
 
     0.589
AEE95589.1
SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486: IPR013693: IPR013247: IPR003646; KEGG: bld:BLi03809 hypothetical protein; PFAM: Stage II sporulation protein D; SH3 type 3 domain protein; SMART: SH3 domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; Bacterial SH3 domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; SpoIID/LytB domain.
 
     0.513
AEE97501.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR015590: IPR001670: IPR018211: IPR012079; KEGG: hmo:HM1_2632 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; SPTR: Aldehyde-alcohol dehydrogenase; PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.487
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.458
AEE96447.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR009737: IPR011538: IPR019554: IPR019575: IPR 017900: IPR001949: IPR017896; KEGG: cth:Cthe_0341 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: NADH-ubiquinone oxidoreductase- [...]
  
    0.443
AEE96513.1
COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731: IPR017900: IPR017896; KEGG: cno:NT01CX_1204 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein, alpha subunit; PFAM: 4Fe-4S binding domain; Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain.
     
 0.443
rpsP
COGs: COG0228 Ribosomal protein S16; InterPro IPR000307: IPR020592; KEGG: bbe:BBR47_36170 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.436
AEE96511.1
COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090: IPR006089; KEGG: tye:THEYE_A0567 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase, short-chain specific; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
     
 0.434
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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