STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95612.1Glycosidase related protein; COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: csc:Csac_0762 glycosidase, PH1107-related; PFAM: glycosidase related protein; SPTR: Glycosidase, PH1107-related; PFAM: Domain of unknown function (DUF377). (297 aa)    
Predicted Functional Partners:
AEE97507.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: csc:Csac_1729 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
 
  
 0.788
AEE96967.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: csc:Csac_1729 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
 
  
 0.787
AEE97506.1
KEGG: cth:Cthe_3115 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.781
ychF
GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.566
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.