STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95657.1AAA ATPase; COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); KEGG: tpd:Teth39_2206 AAA ATPase; SPTR: AAA ATPase; PFAM: Uncharacterized conserved protein (DUF2075). (263 aa)    
Predicted Functional Partners:
AEE95412.1
Integrase catalytic region; InterPro IPR001584; KEGG: tjr:TherJR_2644 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain.
  
 0.907
AEE97996.1
KEGG: swo:Swol_1705 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.680
AEE97702.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: ckr:CKR_0346 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein.
  
     0.633
AEE96048.1
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299: IPR001444: IPR010930; KEGG: slp:Slip_0951 flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.595
AEE95658.1
RNA-directed DNA polymerase (Reverse transcriptase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000123: IPR000477: IPR013597; KEGG: ere:EUBREC_2457 putative recombinase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; SPTR: Putative uncharacterized protein; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
 
     0.485
AEE97684.1
Transposase IS4 family protein; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: swo:Swol_2238 transposase; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein; PFAM: Transposase DDE domain.
  
     0.425
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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