STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95661.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: lrh:LGG_00142 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: DNA-binding protein; PFAM: Helix-turn-helix. (209 aa)    
Predicted Functional Partners:
AEE95322.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tit:Thit_1413 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
  
     0.671
AEE96927.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: gym:GYMC10_5352 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
  
     0.631
AEE97710.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tte:TTE2125 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Predicted Transcriptional regulator; PFAM: Helix-turn-helix.
 
  
 0.587
AEE98054.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tit:Thit_1413 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
 
  
 0.578
AEE95660.1
ABC transporter related protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439: IPR017940: IPR003593; KEGG: ate:Athe_1962 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter transmembrane region.
  
  
 0.504
AEE95659.1
Hypothetical protein; KEGG: shl:Shal_1353 putative signal transduction protein; SPTR: Putative signal transduction protein.
       0.445
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.