STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95711.1Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: tye:THEYE_A1260 deoxyribonuclease, TatD family; PFAM: Radical SAM domain protein; SPTR: Deoxyribonuclease, TatD family; PFAM: Radical SAM superfamily. (196 aa)    
Predicted Functional Partners:
AEE95728.1
Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR018228: IPR015991: IPR012278: IPR001130; KEGG: cdf:CD3539 putative deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: Putative uncharacterized protein; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
     0.946
AEE95712.1
Small multi-drug export protein; COGs: COG2426 membrane protein; InterPro IPR009577; KEGG: amt:Amet_0715 putative small multi-drug export; PFAM: small multi-drug export protein; SPTR: Putative small multi-drug export; PFAM: Putative small multi-drug export protein.
       0.773
AEE95709.1
Accessory gene regulator B; COGs: COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide; InterPro IPR006741; KEGG: tjr:TherJR_2656 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; SPTR: Accessory gene regulator protein B; PFAM: Accessory gene regulator B.
     
 0.525
AEE95710.1
KEGG: amt:Amet_1280 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.522
AEE95708.1
Hypothetical protein; KEGG: cbt:CLH_1355 putative autoinducer prepeptide; SPTR: Putative lipoprotein.
       0.467
AEE96433.1
COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878: IPR003754: IPR003043: IPR006366; KEGG: pth:PTH_0973 uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase.
  
  
 0.414
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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