STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95745.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: cbk:CLL_A1952 transcriptional regulator, MerR family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Immunity repressor protein; PFAM: Helix-turn-helix. (121 aa)    
Predicted Functional Partners:
AEE95744.1
Protein of unknown function DUF955; COGs: COG2856 Zn peptidase; InterPro IPR010359; KEGG: cbi:CLJ_B2579 hypothetical immunity region protein 2; PFAM: protein of unknown function DUF955; SPTR: Hypothetical immunity region protein 2; PFAM: Domain of unknown function (DUF955).
  
  
 0.768
AEE95743.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: tpd:Teth39_2246 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
  
 0.628
AEE95746.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: ddf:DEFDS_1061 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: MATE efflux family protein; PFAM: Helix-turn-helix.
 
    
0.518
AEE95747.1
Helix-turn-helix domain protein; InterPro IPR002711: IPR001387: IPR003615; KEGG: pfu:PF0900 hypothetical protein; PFAM: helix-turn-helix domain protein; HNH endonuclease; SMART: HNH nuclease; helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; HNH endonuclease.
       0.450
AEE95748.1
InterPro IPR010093; KEGG: cth:Cthe_2463 DNA binding domain-containing protein; SPTR: DNA binding domain, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
  
    0.441
AEE95749.1
Hypothetical protein; KEGG: dre:100334565 fasciculation and elongation protein zeta-1-like.
       0.437
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.