STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95754.1KEGG: cth:Cthe_2464 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacteriophage Mu Gam like protein. (184 aa)    
Predicted Functional Partners:
AEE95751.1
Hypothetical protein; KEGG: bbt:BBta_4667 DNA topoisomerase IV subunit A.
       0.741
AEE95752.1
GTPase; KEGG: tan:TA02800 GTPase; SPTR: GTPase, putative.
       0.741
AEE95753.1
KEGG: bhy:BHWA1_02340 hypothetical protein.
       0.741
AEE95755.1
KEGG: ckr:CKR_2913 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.723
AEE95756.1
Hypothetical protein.
       0.714
AEE95750.1
KEGG: sga:GALLO_1934 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.702
AEE95748.1
InterPro IPR010093; KEGG: cth:Cthe_2463 DNA binding domain-containing protein; SPTR: DNA binding domain, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family.
       0.523
AEE95749.1
Hypothetical protein; KEGG: dre:100334565 fasciculation and elongation protein zeta-1-like.
       0.523
AEE95747.1
Helix-turn-helix domain protein; InterPro IPR002711: IPR001387: IPR003615; KEGG: pfu:PF0900 hypothetical protein; PFAM: helix-turn-helix domain protein; HNH endonuclease; SMART: HNH nuclease; helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; HNH endonuclease.
       0.507
AEE95758.1
Primosome, DnaD subunit; InterPro IPR006343; KEGG: bge:BC1002_6533 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: primosome, DnaD subunit; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
       0.494
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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