STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95873.1Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: ckr:CKR_1968 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor. (126 aa)    
Predicted Functional Partners:
AEE95874.1
Peptidase M56 BlaR1; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: ckr:CKR_1967 hypothetical protein; PFAM: peptidase M56 BlaR1; SPTR: Peptidase M56 BlaR1; PFAM: BlaR1 peptidase M56.
 
 
 0.996
AEE95502.1
Peptidase M56 BlaR1; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: cac:CA_C3437 Zn-dependent protease; PFAM: peptidase M56 BlaR1; SPTR: Predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily); PFAM: BlaR1 peptidase M56.
 
 
 0.986
AEE95503.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bca:BCE_1175 penicillinase repressor; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; PFAM: TnsA endonuclease C terminal; Penicillinase repressor.
  
  
 
0.913
AEE96452.1
Copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR006121: IPR000428: IPR017969: IPR006122; KEGG: ate:Athe_2279 copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Copper-translocating P-type ATPase; TIGRFAM: copper ion binding protein; PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein.
  
  
 0.646
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.473
AEE95875.1
Hypothetical protein; KEGG: hmo:HM1_2322 polynucleotide phosphorylase/polyadenylase; SPTR: Possible exported protein.
       0.440
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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