STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95896.1Integrase catalytic region; InterPro IPR001584; KEGG: tjr:TherJR_2621 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain. (445 aa)    
Predicted Functional Partners:
AEE95412.1
Integrase catalytic region; InterPro IPR001584; KEGG: tjr:TherJR_2644 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase catalytic region; PFAM: Integrase core domain.
 
   
 0.486
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.438
AEE97702.1
Transposase IS4 family protein; InterPro IPR002559; KEGG: ckr:CKR_0346 hypothetical protein; PFAM: transposase IS4 family protein; SPTR: Putative uncharacterized protein.
  
     0.416
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.