STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE95980.1Protein of unknown function DUF322; COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: tpd:Teth39_1096 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322). (137 aa)    
Predicted Functional Partners:
AEE95981.1
KEGG: bbe:BBR47_23330 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322).
 
     0.782
AEE95982.1
Protein of unknown function DUF2273; InterPro IPR018730; KEGG: csc:Csac_2124 hypothetical protein; PFAM: Protein of unknown function DUF2273; SPTR: Putative uncharacterized protein; PFAM: Small integral membrane protein (DUF2273).
       0.732
AEE95979.1
KEGG: amt:Amet_2499 hypothetical protein; SPTR: Stage III sporulation protein AH.
  
    0.705
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
    0.695
AEE95978.1
InterPro IPR014195; KEGG: cby:CLM_2106 stage III sporulation protein AG; SPTR: Stage III sporulation protein AG; TIGRFAM: stage III sporulation protein AG; TIGRFAM: stage III sporulation protein AG.
       0.673
AEE95977.1
Stage III sporulation protein AF; InterPro IPR014245; KEGG: cce:Ccel_1911 hypothetical protein; PFAM: Sporulation stage III protein AF; SPTR: Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AF; PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF.
  
    0.659
AEE95975.1
InterPro IPR014211; KEGG: amt:Amet_2495 sporulation stage III, protein AD; SPTR: Sporulation stage III, protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
    0.646
AEE95976.1
InterPro IPR014194; KEGG: amt:Amet_2496 sporulation stage III, protein AE; PFAM: Sporulation stage III protein AE; SPTR: Sporulation stage III, protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
    0.646
AEE95974.1
InterPro IPR009570; KEGG: tmt:Tmath_1134 stage III sporulation protein AC; SPTR: Stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.
       0.618
AEE95972.1
Stage III sporulation protein AA; COGs: COG3854 conserved hypothetical protein; InterPro IPR003593: IPR014217; KEGG: tpd:Teth39_1088 AAA ATPase; SMART: AAA ATPase; SPTR: AAA ATPase; TIGRFAM: stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA.
       0.611
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.