STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE96004.1Sporulation protein YabP; InterPro IPR012504; KEGG: cth:Cthe_2659 YabP-like protein; PFAM: YabP family protein; SPTR: YabP-like protein; TIGRFAM: sporulation protein YabP; PFAM: YabP family; TIGRFAM: sporulation protein YqfC; sporulation protein YabP. (101 aa)    
Predicted Functional Partners:
AEE96005.1
Spore cortex biosynthesis protein YabQ; InterPro IPR014242: IPR019074; KEGG: tjr:TherJR_0188 spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like; SPTR: Spore cortex biosynthesis protein YabQ; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ.
  
  
 0.981
AEE95974.1
InterPro IPR009570; KEGG: tmt:Tmath_1134 stage III sporulation protein AC; SPTR: Stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC.
  
  
 0.878
AEE95998.1
Transcriptional regulator, AbrB family; InterPro IPR014213: IPR006339: IPR007159; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression; PFAM: SpoVT/AbrB domain-containing protein; SPTR: Regulators of stationary/sporulation gene expression; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T.
 
     0.864
AEE96290.1
Sporulation protein YqfD; InterPro IPR010690; KEGG: tmt:Tmath_0960 sporulation protein YqfD; PFAM: stage IV sporulation YqfD; SPTR: Sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; manually curated; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
 
   
 0.851
AEE95550.1
InterPro IPR014208; KEGG: tmt:Tmath_0198 sporulation transcriptional regulator SpoIIID; SPTR: Transcription regulator of sigma-E/sigma-K-dependent gene spoIIID; TIGRFAM: sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID.
  
   
 0.831
AEE97251.1
InterPro IPR014202; KEGG: aoe:Clos_0291 sporulation stage II protein R; PFAM: Sporulation stage II protein R; SPTR: Sporulation stage II protein R; TIGRFAM: stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.
  
  
 0.829
spoIIAB
Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
   
 0.826
AEE96199.1
Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR011642: IPR014226; KEGG: tpd:Teth39_1298 nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein; SPTR: Sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ.
 
   
 0.819
AEE95993.1
Stage IV sporulation protein B; InterPro IPR014219: IPR008763; KEGG: tmt:Tmath_1152 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PRIAM: SpoIVB peptidase; SPTR: Peptidase S55, SpoIVB; TIGRFAM: stage IV sporulation protein B; PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B.
 
   
 0.807
AEE95975.1
InterPro IPR014211; KEGG: amt:Amet_2495 sporulation stage III, protein AD; SPTR: Sporulation stage III, protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
  
 0.790
Your Current Organism:
Mahella australiensis
NCBI taxonomy Id: 697281
Other names: M. australiensis 50-1 BON, Mahella australiensis 50-1 BON, Mahella australiensis DSM 15567, Mahella australiensis str. 50-1 BON, Mahella australiensis strain 50-1 BON
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